EnhancerDB
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  3. rs552676818[chr17:48810609]
Enhancers that have rs552676818[chr17:48810609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48801785 48811959 enh52524
Liver (HepG2) Brain (SK-N-SH) Large Intestine Colon (HCT116) Neural Stem Cells (H9) Stomach
Transcript factors that have rs552676818[chr17:48810609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48810593 48810611 IRF2 JASPAR yes 54716145
chr17 48810603 48810624 IRF1 JASPAR yes 54716148
chr17 48810604 48810610 LEF1 TRANSFAC yes 54716149
chr17 48810604 48810610 SOX10 JASPAR yes 54716150
chr17 48810604 48810619 FOXP1 JASPAR yes 54716151
chr17 48810605 48810616 FOXP2 JASPAR yes 54716152
chr17 48810605 48810617 FOXC2 JASPAR yes 54716153
chr17 48810605 48810620 STAT2 JASPAR yes 54716154
chr17 48810606 48810621 FOXP1 JASPAR yes 54716155
chr17 48810608 48810623 FOXP1 JASPAR yes 54716156
chr17 48810609 48810624 FOXP1 JASPAR yes 54716157
Genes associated with rs552676818[chr17:48810609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More