EnhancerDB
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  3. rs552679477[chr13:110511873]
Enhancers that have rs552679477[chr13:110511873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110508745 110517468 enh15489
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs552679477[chr13:110511873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110511498 110512045 ZNF143 GTRD no Epithelial (MCF-7) 21604942
chr13 110511570 110512015 ZNF143 GTRD no Epithelial (MCF-7) 21604943
chr13 110511573 110512026 ZNF143 GTRD no Epithelial (MCF-7) 21604944
chr13 110511585 110512109 ZNF143 GTRD no Epithelial (MCF-7) 21604945
chr13 110511597 110512079 ZNF143 GTRD no Epithelial (MCF-7) 21604946
chr13 110511599 110512117 ZNF143 GTRD no Epithelial (MCF-7) 21604947
chr13 110511606 110512234 ZNF143 GTRD no Epithelial (MCF-7) 21604948
chr13 110511724 110511935 ZNF143 GTRD no Epithelial (MCF-7) 21604949
chr13 110511862 110511874 NHLH1 JASPAR yes 60301234
chr13 110511863 110511873 NHLH1 JASPAR yes 60301235
chr13 110511868 110511879 STAT3 JASPAR yes 60301236
Genes associated with rs552679477[chr13:110511873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More