EnhancerDB
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  3. rs552679624[chr1:53639403]
Enhancers that have rs552679624[chr1:53639403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53634965 53653615 enh11857
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Bone (Osteoblast) Placenta Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs552679624[chr1:53639403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53639385 53639405 RREB1 JASPAR yes 28918238
chr1 53639387 53639407 RREB1 JASPAR yes 28918239
chr1 53639389 53639409 RREB1 JASPAR yes 28918240
chr1 53639391 53639411 RREB1 JASPAR yes 28918241
chr1 53639393 53639413 RREB1 JASPAR yes 28918242
chr1 53639395 53639415 RREB1 JASPAR yes 28918243
chr1 53639397 53639417 RREB1 JASPAR yes 28918244
Genes associated with rs552679624[chr1:53639403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More