EnhancerDB
  1. Home
  2. SNP
  3. rs552685946[chr1:172862710]
Enhancers that have rs552685946[chr1:172862710]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172862488 172862855 vista3919
VISTA
Transcript factors that have rs552685946[chr1:172862710]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172862445 172862921 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350367
chr1 172862445 172862921 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846226
chr1 172862464 172862860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350368
chr1 172862464 172862860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846228
chr1 172862537 172862881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350369
chr1 172862537 172862881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846229
Genes associated with rs552685946[chr1:172862710], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More