EnhancerDB
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  3. rs552690530[chr5:176412148]
Enhancers that have rs552690530[chr5:176412148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 176410422 176427455 enh8889
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Stomach
Transcript factors that have rs552690530[chr5:176412148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 176412142 176412163 IRF1 JASPAR yes 68072134
chr5 176412144 176412159 STAT2 JASPAR yes 68072135
chr5 176412145 176412159 STAT1 JASPAR yes 68072136
chr5 176412146 176412161 IRF9 JASPAR yes 68072137
chr5 176412148 176412163 FOXP1 JASPAR yes 68072138
Genes associated with rs552690530[chr5:176412148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More