EnhancerDB
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  3. rs552716970[chr15:41198641]
Enhancers that have rs552716970[chr15:41198641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41192765 41214015 enh3543
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs552716970[chr15:41198641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41198087 41198683 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21650963
chr15 41198213 41198878 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650966
chr15 41198331 41198881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650969
chr15 41198368 41198738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650970
chr15 41198385 41198769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650971
chr15 41198426 41198802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650973
chr15 41198464 41198821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650974
chr15 41198464 41199124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650975
chr15 41198472 41198928 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650976
chr15 41198472 41198936 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21650977
chr15 41198487 41198883 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650978
chr15 41198495 41198971 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650979
chr15 41198496 41198820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650980
chr15 41198510 41198950 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650981
chr15 41198511 41199007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650982
chr15 41198512 41198976 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650983
chr15 41198517 41198877 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650984
chr15 41198517 41198892 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650985
chr15 41198521 41198881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650986
chr15 41198530 41198860 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650987
chr15 41198544 41199020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650988
chr15 41198549 41198721 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650989
chr15 41198553 41198833 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650990
chr15 41198556 41198886 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650991
chr15 41198561 41198951 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650992
chr15 41198572 41198862 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650993
chr15 41198575 41198851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650994
chr15 41198577 41198913 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21650995
chr15 41198580 41198882 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650996
chr15 41198585 41198875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650997
chr15 41198589 41198859 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650998
chr15 41198590 41198843 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650999
chr15 41198593 41199169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651000
chr15 41198599 41198909 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21651001
chr15 41198605 41198838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651002
chr15 41198607 41198811 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21651003
chr15 41198611 41198893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651004
chr15 41198613 41198783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21651005
chr15 41198625 41198799 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21651006
chr15 41198625 41198828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21651007
chr15 41198625 41199135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21651008
chr15 41198626 41199066 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21651009
chr15 41198637 41198641 H4TF2 TRANSFAC yes 22961643
Genes associated with rs552716970[chr15:41198641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More