EnhancerDB
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  3. rs552771533[chr12:48216674]
Enhancers that have rs552771533[chr12:48216674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs552771533[chr12:48216674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48216663 48216678 TFAP2A JASPAR yes 120719491
chr12 48216663 48216678 TFAP2C JASPAR yes 120719492
chr12 48216665 48216680 TFAP2C JASPAR yes 120719493
chr12 48216666 48216678 TFAP2A JASPAR yes 120719494
chr12 48216666 48216678 TFAP2B JASPAR yes 120719495
chr12 48216666 48216678 TFAP2C JASPAR yes 120719496
chr12 48216673 48216677 LFA1 TRANSFAC yes 120719497
Genes associated with rs552771533[chr12:48216674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More