EnhancerDB
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  3. rs552820193[chr3:187706879]
Enhancers that have rs552820193[chr3:187706879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187690405 187726875 enh7765
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (PC-9) Blood (OCI-LY7) Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Thymus Heart
Transcript factors that have rs552820193[chr3:187706879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 187706870 187706882 FOXC2 JASPAR yes 8433537
chr3 187706871 187706882 FOXC1 JASPAR yes 8433538
chr3 187706874 187706884 HOXA13 JASPAR yes 8433539
chr3 187706874 187706884 HOXB13 JASPAR yes 8433540
chr3 187706874 187706884 HOXD13 JASPAR yes 8433541
chr3 187706874 187706885 HOXA10 JASPAR yes 8433542
chr3 187706875 187706884 CDX1 JASPAR yes 8433543
chr3 187706875 187706886 CDX2 JASPAR yes 8433544
Genes associated with rs552820193[chr3:187706879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More