EnhancerDB
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  3. rs552820518[chr14:69475127]
Enhancers that have rs552820518[chr14:69475127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 69466145 69483914 enh15725
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Pancreas (Panc1) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Spleen Uterus Epithelial (MCF-7)
Transcript factors that have rs552820518[chr14:69475127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 69474556 69476087 ZNF143 GTRD no Epithelial (MCF-7) 21626540
chr14 69474569 69476090 ZNF143 GTRD no Epithelial (MCF-7) 21626541
chr14 69474744 69475709 ZNF143 GTRD no Epithelial (MCF-7) 21626542
chr14 69474766 69475847 ZNF143 GTRD no Epithelial (MCF-7) 21626543
chr14 69474783 69475858 ZNF143 GTRD no Epithelial (MCF-7) 21626544
chr14 69474799 69476017 ZNF143 GTRD no Epithelial (MCF-7) 21626545
chr14 69474885 69476081 ZNF143 GTRD no Epithelial (MCF-7) 21626546
chr14 69475016 69475909 ZNF143 GTRD no Epithelial (MCF-7) 21626547
chr14 69475057 69475879 ZNF143 GTRD no Epithelial (MCF-7) 21626548
chr14 69475080 69475926 ZNF143 GTRD no Epithelial (MCF-7) 21626549
chr14 69475085 69475699 ZNF143 GTRD no Epithelial (MCF-7) 21626550
chr14 69475088 69475507 ZNF143 GTRD no Epithelial (MCF-7) 21626551
chr14 69475116 69475127 EBF1 JASPAR yes 116278046
chr14 69475126 69475137 CDX2 JASPAR yes 116278047
Genes associated with rs552820518[chr14:69475127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More