EnhancerDB
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  3. rs552848929[chr2:39329386]
Enhancers that have rs552848929[chr2:39329386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552848929[chr2:39329386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39329369 39329387 ESR2 JASPAR yes 73182304
chr2 39329385 39329397 GLI2 JASPAR yes 73182306
Genes associated with rs552848929[chr2:39329386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More