EnhancerDB
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  3. rs552866943[chr16:29604930]
Enhancers that have rs552866943[chr16:29604930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552866943[chr16:29604930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29604325 29605436 ZNF143 GTRD no Epithelial (MCF-7) 21702453
chr16 29604410 29605227 ZNF274 GTRD no Liver (HepG2) 21702454
chr16 29604422 29605219 ZNF143 GTRD no Epithelial (MCF-7) 21702455
chr16 29604484 29605195 ZNF274 GTRD no Liver (HepG2) 21702456
chr16 29604493 29605209 ZNF143 GTRD no Epithelial (MCF-7) 21702457
chr16 29604527 29605430 ZNF143 GTRD no Epithelial (MCF-7) 21702458
chr16 29604540 29605220 ZBTB33 GTRD no Lung (A549) 21702459
chr16 29604541 29605179 ZNF143 GTRD no Epithelial (MCF-7) 21702460
chr16 29604546 29605261 ZNF143 GTRD no Epithelial (MCF-7) 21702461
chr16 29604547 29605224 ZBTB33 GTRD no Lung (A549) 21702462
chr16 29604551 29605334 ZBTB33 GTRD no Lung (A549) 21702463
chr16 29604555 29605481 ZNF143 GTRD no Epithelial (MCF-7) 21702464
chr16 29604556 29605265 ZBTB33 GTRD no Brain (SK-N-SH) 21702465
chr16 29604558 29605223 ZNF274 GTRD no Liver (HepG2) 21702466
chr16 29604565 29606401 ZNF274 GTRD no Liver (HepG2) 21702467
chr16 29604567 29604979 ZNF274 GTRD no Liver (HepG2) 21702468
chr16 29604567 29605146 ZNF274 GTRD no Liver (HepG2) 21702469
chr16 29604570 29605178 ZNF274 GTRD no Liver (HepG2) 21702470
chr16 29604576 29605229 ZBTB33 GTRD no Brain (SK-N-SH) 21702471
chr16 29604578 29605259 ZNF143 GTRD no Epithelial (MCF-7) 21702472
chr16 29604580 29605158 ZBTB33 GTRD no Brain (SK-N-SH) 21702473
chr16 29604586 29605179 ZNF143 GTRD no Epithelial (MCF-7) 21702474
chr16 29604587 29605148 ZNF274 GTRD no Bone Marrow (K562) 21702475
chr16 29604589 29605021 ZNF274 GTRD no Liver (HepG2) 21702476
chr16 29604592 29605277 ZNF274 GTRD no Liver (HepG2) 21702477
chr16 29604595 29605194 ZNF143 GTRD no Epithelial (MCF-7) 21702478
chr16 29604595 29605219 ZNF274 GTRD no Liver (HepG2) 21702479
chr16 29604597 29605282 ZBTB33 GTRD no Lung (A549) 21702480
chr16 29604598 29605129 ZBTB33 GTRD no Brain (SK-N-SH) 21702481
chr16 29604604 29606358 ZNF274 GTRD no Liver (HepG2) 21702482
chr16 29604610 29605037 ZNF274 GTRD no Liver (HepG2) 21702483
chr16 29604611 29605216 ZNF143 GTRD no Epithelial (MCF-7) 21702484
chr16 29604613 29605172 ZNF143 GTRD no Epithelial (MCF-7) 21702485
chr16 29604613 29605188 ZBTB33 GTRD no Brain (SK-N-SH) 21702486
chr16 29604613 29605221 ZNF274 GTRD no Cervix (HeLa-S3) 21702487
chr16 29604613 29605224 ZNF143 GTRD no Epithelial (MCF-7) 21702488
chr16 29604614 29605195 ZNF274 GTRD no Bone Marrow (K562) 21702489
chr16 29604615 29605227 ZNF274 GTRD no Bone Marrow (K562) 21702490
chr16 29604616 29605042 ZBTB33 GTRD no Lung (A549) 21702491
chr16 29604616 29605230 ZNF274 GTRD no Bone Marrow (K562) 21702492
chr16 29604617 29605221 ZBTB33 GTRD no Lung (A549) 21702493
chr16 29604619 29605221 ZNF274 GTRD no Bone Marrow (K562) 21702494
chr16 29604626 29605163 ZNF274 GTRD no Liver (HepG2) 21702495
chr16 29604631 29605145 ZNF274 GTRD no Liver (HepG2) 21702496
chr16 29604632 29605030 ZNF274 GTRD no Bone Marrow (K562) 21702497
chr16 29604633 29605321 ZNF143 GTRD no Epithelial (MCF-7) 21702498
chr16 29604635 29605221 ZNF274 GTRD no Bone Marrow (K562) 21702499
chr16 29604637 29605211 ZNF274 GTRD no Liver (HepG2) 21702500
chr16 29604638 29605185 TCF7L2 GTRD no Colon (HCT116) 21702501
chr16 29604640 29605215 ZNF274 GTRD no Liver (HepG2) 21702502
chr16 29604641 29605225 ZNF143 GTRD no Epithelial (MCF-7) 21702503
chr16 29604644 29605195 ZBTB33 GTRD no Lung (A549) 21702504
chr16 29604645 29605204 ZNF274 GTRD no Liver (HepG2) 21702505
chr16 29604658 29605159 ZNF143 GTRD no Epithelial (MCF-7) 21702506
chr16 29604672 29605166 ZNF274 GTRD no Liver (HepG2) 21702507
chr16 29604676 29605240 MYOD GTRD no Muscle (Myoblast) 21702508
chr16 29604687 29605226 ZNF143 GTRD no Epithelial (MCF-7) 21702509
chr16 29604690 29605177 ZNF143 GTRD no Epithelial (MCF-7) 21702510
chr16 29604713 29605211 ZNF143 GTRD no Epithelial (MCF-7) 21702511
chr16 29604718 29605108 ZNF274 GTRD no Cervix (HeLa-S3) 21702512
chr16 29604719 29605106 ZNF143 GTRD no Epithelial (MCF-7) 21702513
chr16 29604720 29605215 ZBTB33 GTRD no Brain (SK-N-SH) 21702514
chr16 29604724 29605296 ZBTB33 GTRD no Lung (A549) 21702515
chr16 29604729 29605049 ZNF274 GTRD no Liver (HepG2) 21702516
chr16 29604732 29605529 ZNF143 GTRD no Epithelial (MCF-7) 21702517
chr16 29604735 29605135 ZBTB33 GTRD no Lung (A549) 21702518
chr16 29604740 29605160 ZBTB33 GTRD no Brain (SK-N-SH) 21702519
chr16 29604746 29605151 ZNF274 GTRD no Bone Marrow (K562) 21702520
chr16 29604751 29605089 ZBTB33 GTRD no Brain (SK-N-SH) 21702521
chr16 29604768 29605441 TCF7L2 GTRD no Colon (HCT116) 21702522
chr16 29604791 29605134 ZNF143 GTRD no Epithelial (MCF-7) 21702523
chr16 29604792 29605155 ZNF274 GTRD no Liver (HepG2) 21702524
chr16 29604826 29605489 TCF7L2 GTRD no Colon (HCT116) 21702525
chr16 29604837 29605203 ZNF143 GTRD no Epithelial (MCF-7) 21702526
chr16 29604841 29605553 ZNF143 GTRD no Epithelial (MCF-7) 21702527
chr16 29604849 29605088 ZNF274 GTRD no Bone Marrow (K562) 21702528
chr16 29604851 29605088 ZNF274 GTRD no Bone Marrow (K562) 21702529
chr16 29604889 29605612 TCF7L2 GTRD no Colon (HCT116) 21702530
chr16 29604902 29605384 TCF7L2 GTRD no Colon (HCT116) 21702531
chr16 29604918 29606016 TCF7L2 GTRD no Colon (HCT116) 21702532
Genes associated with rs552866943[chr16:29604930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More