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- rs552890180[chr12:49280717]
Enhancers that have rs552890180[chr12:49280717]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
49273705 |
49285739 |
enh29564 |
|
|
Transcript factors that have rs552890180[chr12:49280717]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
49274451
|
49280808
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21544296
|
|
|
chr12
|
49274451
|
49280808
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108029562
|
|
|
chr12
|
49274451
|
49280808
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108029563
|
|
|
chr12
|
49280699
|
49280720
|
ZNF263
|
JASPAR
|
yes
|
|
120753586
|
|
|
chr12
|
49280715
|
49280723
|
EHF
|
JASPAR
|
yes
|
|
120753587
|
|
|
chr12
|
49280717
|
49281127
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
21544362
|
|
Genes associated with rs552890180[chr12:49280717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |