EnhancerDB
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  3. rs552908220[chr12:105089456]
Enhancers that have rs552908220[chr12:105089456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105086025 105108495 enh29941
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Thyroid Breast Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Stomach
chr12 105089120 105089756 vista14729
VISTA
Transcript factors that have rs552908220[chr12:105089456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105089049 105089709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569733
chr12 105089049 105089709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055680
chr12 105089097 105089727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569734
chr12 105089097 105089727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055682
chr12 105089116 105089685 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569735
chr12 105089116 105089685 RUNX3 UCSC Txn Factor no Conserved 108055683
chr12 105089116 105089685 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055684
chr12 105089146 105089830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569736
chr12 105089146 105089830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055685
chr12 105089165 105089681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569737
chr12 105089165 105089681 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055686
chr12 105089174 105089694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569738
chr12 105089174 105089694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055687
chr12 105089183 105089622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569739
chr12 105089183 105089622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055688
chr12 105089197 105089527 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569740
chr12 105089197 105089527 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055689
chr12 105089199 105089503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569741
chr12 105089199 105089503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055690
chr12 105089247 105089603 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569742
chr12 105089247 105089603 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055691
chr12 105089259 105089519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569743
chr12 105089259 105089519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055692
chr12 105089270 105089600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569744
chr12 105089270 105089600 BHLHE40 UCSC Txn Factor no Conserved 108055693
chr12 105089270 105089600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055694
chr12 105089272 105089552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569745
chr12 105089272 105089552 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055695
chr12 105089281 105089719 RELA UCSC Txn Factor no Conserved 108055696
chr12 105089302 105089612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569746
chr12 105089302 105089612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055697
chr12 105089305 105089595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569747
chr12 105089305 105089595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055698
chr12 105089306 105089626 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569748
chr12 105089306 105089626 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055699
chr12 105089311 105089607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569749
chr12 105089311 105089607 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055700
chr12 105089322 105089706 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569750
chr12 105089322 105089706 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055701
chr12 105089322 105089758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569751
chr12 105089322 105089758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055702
chr12 105089334 105089515 SPI1 UCSC Txn Factor no Conserved 108055703
chr12 105089335 105089515 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569752
chr12 105089335 105089515 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055704
chr12 105089360 105089517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569753
chr12 105089360 105089517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055705
chr12 105089362 105089726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569754
chr12 105089362 105089726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055706
chr12 105089441 105089556 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569755
chr12 105089441 105089556 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055707
chr12 105089443 105089677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569756
chr12 105089443 105089677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055708
chr12 105089454 105089468 ONECUT3 JASPAR yes 82469459
chr12 105089454 105089468 ONECUT3 JASPAR yes 123408440
Genes associated with rs552908220[chr12:105089456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More