EnhancerDB
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  3. rs552920002[chr1:9898056]
Enhancers that have rs552920002[chr1:9898056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9892669 9907022 enh42876
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Stomach Muscle (A673) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Muscle (Myotube) Uterus Heart
Transcript factors that have rs552920002[chr1:9898056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9898036 9898057 IRF1 JASPAR yes 26684228
chr1 9898037 9898058 ZNF263 JASPAR yes 26684229
chr1 9898040 9898061 ZNF263 JASPAR yes 26684233
chr1 9898043 9898064 ZNF263 JASPAR yes 26684234
chr1 9898047 9898068 IRF1 JASPAR yes 26684236
chr1 9898048 9898069 ZNF263 JASPAR yes 26684237
chr1 9898051 9898066 STAT2 JASPAR yes 26684239
chr1 9898051 9898072 IRF1 JASPAR yes 26684240
chr1 9898051 9898072 ZNF263 JASPAR yes 26684241
chr1 9898052 9898066 TCF7L2 JASPAR yes 26684242
chr1 9898052 9898073 ZNF263 JASPAR yes 26684243
chr1 9898055 9898076 IRF1 JASPAR yes 26684244
chr1 9898055 9898076 ZNF263 JASPAR yes 26684245
Genes associated with rs552920002[chr1:9898056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More