EnhancerDB
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  3. rs552928406[chr1:9763685]
Enhancers that have rs552928406[chr1:9763685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9757387 9767675 enh51
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Blood (T-cell) Stomach
Transcript factors that have rs552928406[chr1:9763685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9763670 9763685 RUNX2 JASPAR yes 26671422
chr1 9763676 9763685 THAP1 JASPAR yes 26671423
chr1 9763679 9763691 NHLH1 JASPAR yes 26671425
chr1 9763680 9763690 NHLH1 JASPAR yes 26671426
Genes associated with rs552928406[chr1:9763685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More