EnhancerDB
  1. Home
  2. SNP
  3. rs552942107[chr1:202029491]
Enhancers that have rs552942107[chr1:202029491]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552942107[chr1:202029491]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202027868 202029941 ZNF143 GTRD no Epithelial (MCF-7) 21366115
chr1 202028173 202030388 ZNF143 GTRD no Epithelial (MCF-7) 21366117
chr1 202028173 202030388 ZNF143 GTRD no Epithelial (MCF-7) 107857633
chr1 202028255 202030254 ZNF143 GTRD no Epithelial (MCF-7) 21366118
chr1 202028411 202029833 ZNF274 GTRD no Cervix (HeLa-S3) 21366120
chr1 202028429 202029935 ZNF143 GTRD no Epithelial (MCF-7) 21366121
chr1 202028802 202030528 TCF7L2 GTRD no Colon (HCT116) 21366124
chr1 202028802 202030528 TCF7L2 GTRD no Colon (HCT116) 107857634
chr1 202028830 202030301 ZBTB33 GTRD no Lung (A549) 107857635
chr1 202028844 202029774 ZNF274 GTRD no Cervix (HeLa-S3) 21366125
chr1 202028854 202030374 ZNF274 GTRD no Bone Marrow (K562) 21366126
chr1 202028854 202030374 ZNF274 GTRD no Bone Marrow (K562) 107857636
chr1 202028858 202030440 ZBTB33 GTRD no Lung (A549) 107857637
chr1 202028865 202030427 ZNF274 GTRD no Cervix (HeLa-S3) 21366127
chr1 202028865 202030427 ZNF274 GTRD no Cervix (HeLa-S3) 107857638
chr1 202028869 202030060 AR GTRD no Prostate (PC-3) 21366128
chr1 202028875 202029928 ZNF274 GTRD no Cervix (HeLa-S3) 21366129
chr1 202028885 202030512 ZBTB33 GTRD no Lung (A549) 107857639
chr1 202028888 202029631 ZBTB33 GTRD no Brain (SK-N-SH) 21366130
chr1 202028888 202030063 TCF7L2 GTRD no Colon (HCT116) 21366131
chr1 202028889 202029510 ZNF274 GTRD no Liver (HepG2) 21366132
chr1 202028891 202030332 ZNF274 GTRD no Bone Marrow (K562) 21366133
chr1 202028891 202030332 ZNF274 GTRD no Bone Marrow (K562) 107857640
chr1 202028895 202030244 ZNF143 GTRD no Epithelial (MCF-7) 21366134
chr1 202028897 202029965 ZNF143 GTRD no Epithelial (MCF-7) 21366135
chr1 202028897 202029991 ZNF274 GTRD no Cervix (HeLa-S3) 21366136
chr1 202028903 202029682 ZNF274 GTRD no Cervix (HeLa-S3) 21366137
chr1 202028906 202030405 ZBTB33 GTRD no Lung (A549) 107857641
chr1 202028907 202029531 ZNF274 GTRD no Bone Marrow (K562) 21366139
chr1 202028947 202029643 ZBTB33 GTRD no Brain (SK-N-SH) 21366140
chr1 202028950 202029778 ZBTB33 GTRD no Brain (SK-N-SH) 21366141
chr1 202028952 202029624 ZNF143 GTRD no Epithelial (MCF-7) 21366142
chr1 202028952 202029967 ZNF274 GTRD no Bone Marrow (K562) 21366143
chr1 202028955 202029724 ZBTB33 GTRD no Brain (SK-N-SH) 21366144
chr1 202028963 202029719 ZNF143 GTRD no Epithelial (MCF-7) 21366145
chr1 202028963 202029743 ZBTB33 GTRD no Brain (SK-N-SH) 21366146
chr1 202028966 202030266 ZBTB33 GTRD no Lung (A549) 107857642
chr1 202028969 202030437 ZBTB33 GTRD no Lung (A549) 107857643
chr1 202028977 202030278 ZNF274 GTRD no Bone Marrow (K562) 21366147
chr1 202028977 202030278 ZNF274 GTRD no Bone Marrow (K562) 107857644
chr1 202028979 202029687 ZBTB33 GTRD no Brain (SK-N-SH) 21366148
chr1 202028984 202029658 ZBTB33 GTRD no Brain (SK-N-SH) 21366149
chr1 202029001 202029933 ZNF274 GTRD no Bone Marrow (K562) 21366150
chr1 202029002 202030134 ZNF274 GTRD no Bone Marrow (K562) 21366151
chr1 202029006 202029788 ZBTB33 GTRD no Brain (SK-N-SH) 21366152
chr1 202029007 202029685 ZNF143 GTRD no Epithelial (MCF-7) 21366153
chr1 202029018 202029603 ZBTB33 GTRD no Brain (SK-N-SH) 21366154
chr1 202029018 202029684 ZBTB33 GTRD no Brain (SK-N-SH) 21366155
chr1 202029021 202029674 ZNF274 GTRD no Cervix (HeLa-S3) 21366156
chr1 202029035 202029555 ZNF274 GTRD no Liver (HepG2) 21366157
chr1 202029036 202029603 ZNF274 GTRD no Liver (HepG2) 21366158
chr1 202029048 202029733 TCF7L2 GTRD no Colon (HCT116) 21366159
chr1 202029050 202029526 ZNF274 GTRD no Liver (HepG2) 21366160
chr1 202029053 202030455 ZNF274 GTRD no Bone Marrow (K562) 21366161
chr1 202029053 202030455 ZNF274 GTRD no Bone Marrow (K562) 107857645
chr1 202029058 202029563 ZNF274 GTRD no Bone Marrow (K562) 21366162
chr1 202029068 202030200 ZNF143 GTRD no Epithelial (MCF-7) 21366163
chr1 202029069 202029983 ZNF143 GTRD no Epithelial (MCF-7) 21366164
chr1 202029094 202029505 TCF7L2 GTRD no Colon (HCT116) 21366165
chr1 202029094 202029557 ZBTB33 GTRD no Brain (SK-N-SH) 21366166
chr1 202029097 202029571 ZNF274 GTRD no Liver (HepG2) 21366167
chr1 202029098 202029962 ZNF143 GTRD no Epithelial (MCF-7) 21366168
chr1 202029110 202029549 ZNF274 GTRD no Liver (HepG2) 21366170
chr1 202029110 202030306 ZNF274 GTRD no Bone Marrow (K562) 21366171
chr1 202029110 202030306 ZNF274 GTRD no Bone Marrow (K562) 107857646
chr1 202029114 202030393 ZNF143 GTRD no Epithelial (MCF-7) 21366172
chr1 202029114 202030393 ZNF143 GTRD no Epithelial (MCF-7) 107857647
chr1 202029170 202029553 ZBTB33 GTRD no Brain (SK-N-SH) 21366174
chr1 202029172 202029595 ZNF143 GTRD no Epithelial (MCF-7) 21366175
chr1 202029173 202029517 ZBTB33 GTRD no Brain (SK-N-SH) 21366176
chr1 202029173 202029672 ZBTB33 GTRD no Brain (SK-N-SH) 21366177
chr1 202029175 202030374 ZNF274 GTRD no Bone Marrow (K562) 21366178
chr1 202029175 202030374 ZNF274 GTRD no Bone Marrow (K562) 107857648
chr1 202029190 202029561 ZNF274 GTRD no Liver (HepG2) 21366179
chr1 202029191 202030146 ZNF143 GTRD no Epithelial (MCF-7) 21366180
chr1 202029197 202029747 ZBTB33 GTRD no Brain (SK-N-SH) 21366181
chr1 202029198 202029642 ZNF274 GTRD no Cervix (HeLa-S3) 21366182
chr1 202029200 202029598 ZBTB33 GTRD no Brain (SK-N-SH) 21366183
chr1 202029210 202030250 ZNF274 GTRD no Bone Marrow (K562) 21366184
chr1 202029232 202030198 ZNF143 GTRD no Epithelial (MCF-7) 21366185
chr1 202029240 202029751 ZNF274 GTRD no Bone Marrow (K562) 21366186
chr1 202029245 202030410 ZNF274 GTRD no Bone Marrow (K562) 21366188
chr1 202029245 202030410 ZNF274 GTRD no Bone Marrow (K562) 107857649
chr1 202029255 202030131 ZNF274 GTRD no Cervix (HeLa-S3) 21366189
chr1 202029270 202029565 ZNF274 GTRD no Cervix (HeLa-S3) 21366190
chr1 202029316 202030303 ZNF274 GTRD no Bone Marrow (K562) 21366191
chr1 202029316 202030303 ZNF274 GTRD no Bone Marrow (K562) 107857650
chr1 202029339 202030136 ZNF143 GTRD no Epithelial (MCF-7) 21366192
chr1 202029352 202030120 ZNF143 GTRD no Epithelial (MCF-7) 21366193
chr1 202029401 202030242 ZNF274 GTRD no Bone Marrow (K562) 21366194
chr1 202029481 202029497 ZNF143 JASPAR yes 34547757
chr1 202029486 202029496 SP1 JASPAR yes 34547758
chr1 202029489 202029498 HIC2 JASPAR yes 34547759
Genes associated with rs552942107[chr1:202029491], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More