EnhancerDB
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  3. rs552948004[chr17:48719835]
Enhancers that have rs552948004[chr17:48719835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48713385 48720742 enh17222
Astrocyte Adrenal Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Muscle (A673)
Transcript factors that have rs552948004[chr17:48719835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48719832 48719847 IRF9 JASPAR yes 54710392
chr17 48719833 48719847 IRF7 JASPAR yes 54710393
chr17 48719833 48719847 IRF8 JASPAR yes 54710394
chr17 48719835 48719847 IRF1 JASPAR yes 54710395
Genes associated with rs552948004[chr17:48719835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More