EnhancerDB
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  3. rs552955247[chr17:76931505]
Enhancers that have rs552955247[chr17:76931505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552955247[chr17:76931505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931414 76931858 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21795409
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76931499 76931509 SP1 JASPAR yes 56190349
chr17 76931500 76931508 SP1 TRANSFAC yes 56190350
Genes associated with rs552955247[chr17:76931505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More