EnhancerDB
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  3. rs552964611[chr12:93509628]
Enhancers that have rs552964611[chr12:93509628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 93499545 93526304 enh14896
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552964611[chr12:93509628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 93509107 93510168 ZNF143 GTRD no Epithelial (MCF-7) 21563991
chr12 93509175 93510092 ZNF143 GTRD no Epithelial (MCF-7) 21563993
chr12 93509203 93510141 ZNF143 GTRD no Epithelial (MCF-7) 21563994
chr12 93509256 93509951 ZNF143 GTRD no Epithelial (MCF-7) 21563995
chr12 93509309 93510079 ZNF143 GTRD no Epithelial (MCF-7) 21563996
chr12 93509316 93510106 ZNF143 GTRD no Epithelial (MCF-7) 21563997
chr12 93509332 93509949 ZNF143 GTRD no Epithelial (MCF-7) 21563998
chr12 93509338 93509802 ZNF143 GTRD no Epithelial (MCF-7) 21563999
chr12 93509365 93510150 ZNF143 GTRD no Epithelial (MCF-7) 21564000
chr12 93509384 93509953 ZNF143 GTRD no Epithelial (MCF-7) 21564001
chr12 93509398 93509923 ZNF143 GTRD no Epithelial (MCF-7) 21564002
chr12 93509421 93509928 ZNF143 GTRD no Epithelial (MCF-7) 21564003
chr12 93509460 93509922 ZNF143 GTRD no Epithelial (MCF-7) 21564004
chr12 93509475 93509759 ZNF143 GTRD no Epithelial (MCF-7) 21564005
chr12 93509624 93509628 H1TF2 TRANSFAC yes 122821078
chr12 93509624 93509628 NFE TRANSFAC yes 122821079
chr12 93509624 93509628 SRF TRANSFAC yes 122821080
Genes associated with rs552964611[chr12:93509628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More