EnhancerDB
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  3. rs552965565[chr12:105000232]
Enhancers that have rs552965565[chr12:105000232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs552965565[chr12:105000232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104999766 105000634 ZNF274 GTRD no Blood (GM12878) 21569584
chr12 104999766 105000634 ZNF274 GTRD no Blood (GM12878) 108055469
chr12 105000222 105000235 EOMES JASPAR yes 123398062
chr12 105000224 105000234 TBR1 JASPAR yes 123398063
chr12 105000224 105000235 TBX20 JASPAR yes 123398064
chr12 105000224 105000235 TBX2 JASPAR yes 123398065
chr12 105000225 105000235 TBX21 JASPAR yes 123398066
chr12 105000226 105000234 MGA JASPAR yes 123398067
chr12 105000226 105000234 TBX1 JASPAR yes 123398068
Genes associated with rs552965565[chr12:105000232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More