EnhancerDB
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  3. rs553015930[chr1:28773913]
Enhancers that have rs553015930[chr1:28773913]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28772305 28780210 enh26592
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
Transcript factors that have rs553015930[chr1:28773913]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28773894 28773915 IRF1 JASPAR yes 27771909
chr1 28773895 28773916 IRF1 JASPAR yes 27771910
chr1 28773896 28773917 IRF1 JASPAR yes 27771912
chr1 28773900 28773921 IRF1 JASPAR yes 27771913
chr1 28773901 28773916 FOXP1 JASPAR yes 27771914
chr1 28773903 28773918 FOXP1 JASPAR yes 27771915
chr1 28773905 28773920 FOXP1 JASPAR yes 27771916
chr1 28773906 28773921 FOXP1 JASPAR yes 27771917
chr1 28773907 28773922 FOXP1 JASPAR yes 27771918
chr1 28773908 28773923 FOXP1 JASPAR yes 27771919
Genes associated with rs553015930[chr1:28773913], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More