EnhancerDB
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  3. rs553040986[chr1:226371585]
Enhancers that have rs553040986[chr1:226371585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226367565 226372375 enh955
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Uterus Epithelial (MCF-7)
Transcript factors that have rs553040986[chr1:226371585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226369839 226371861 ZNF274 GTRD no Blood (GM12878) 107875667
chr1 226369897 226371651 ZNF274 GTRD no Blood (GM12878) 107875671
chr1 226370116 226371869 STAT3 GTRD no Blood (OCI-LY7) 21386944
chr1 226370116 226371869 STAT3 GTRD no Blood (OCI-LY7) 107875674
chr1 226371581 226371596 FOXP1 JASPAR yes 35798337
chr1 226371582 226371597 FOXP1 JASPAR yes 35798338
chr1 226371583 226371589 TBP TRANSFAC yes 35798339
chr1 226371583 226371598 FOXP1 JASPAR yes 35798340
chr1 226371583 226371604 IRF1 JASPAR yes 35798341
chr1 226371584 226371599 FOXP1 JASPAR yes 35798342
chr1 226371584 226371605 IRF1 JASPAR yes 35798343
chr1 226371585 226371600 FOXP1 JASPAR yes 35798344
chr1 226371585 226371606 IRF1 JASPAR yes 35798345
Genes associated with rs553040986[chr1:226371585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More