EnhancerDB
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  3. rs553042402[chr16:88267255]
Enhancers that have rs553042402[chr16:88267255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs553042402[chr16:88267255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88266797 88267596 ZNF143 GTRD no Epithelial (MCF-7) 21735551
chr16 88266924 88267787 TCF7L2 GTRD no Colon (HCT116) 21735552
chr16 88267123 88267755 TCF7L2 GTRD no Colon (HCT116) 21735553
chr16 88267215 88267665 TCF7L2 GTRD no Colon (HCT116) 21735554
chr16 88267250 88267265 RUNX2 JASPAR yes 12268714
Genes associated with rs553042402[chr16:88267255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More