EnhancerDB
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  3. rs553060214[chr1:23925268]
Enhancers that have rs553060214[chr1:23925268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 23925201 23925342 vista754
VISTA
Transcript factors that have rs553060214[chr1:23925268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23924732 23925342 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802432
chr1 23925250 23925271 ZNF263 JASPAR yes 27445670
chr1 23925250 23925271 ZNF263 JASPAR yes 118249993
chr1 23925252 23925272 RREB1 JASPAR yes 27445672
chr1 23925252 23925272 RREB1 JASPAR yes 118249995
chr1 23925262 23925282 RREB1 JASPAR yes 27445673
chr1 23925262 23925282 RREB1 JASPAR yes 118249996
chr1 23925265 23925286 ZNF263 JASPAR yes 27445674
chr1 23925265 23925286 ZNF263 JASPAR yes 118249997
Genes associated with rs553060214[chr1:23925268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More