EnhancerDB
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  3. rs553063177[chr3:127465856]
Enhancers that have rs553063177[chr3:127465856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 127460425 127476155 enh7513
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr3 127465577 127465875 vista42325
VISTA
Transcript factors that have rs553063177[chr3:127465856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 127465574 127465981 EP300 UCSC Txn Factor no Conserved 108530238
chr3 127465717 127466068 NR3C1 UCSC Txn Factor no Conserved 108530239
chr3 127465848 127465867 CTCF JASPAR yes 5543679
chr3 127465848 127465867 CTCF JASPAR yes 71047072
chr3 127465852 127465857 USF2 TRANSFAC yes 5543680
chr3 127465852 127465857 USF2 TRANSFAC yes 71047073
chr3 127465855 127465868 NR2F1 JASPAR yes 5543681
chr3 127465855 127465868 NR2F1 JASPAR yes 71047074
chr3 127465856 127465864 CREB1 JASPAR yes 5543682
chr3 127465856 127465864 CREB1 JASPAR yes 71047075
Genes associated with rs553063177[chr3:127465856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More