EnhancerDB
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  3. rs553068731[chr1:12551317]
Enhancers that have rs553068731[chr1:12551317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs553068731[chr1:12551317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12551307 12551321 MTF1 JASPAR yes 26825721
chr1 12551309 12551323 BATF3 JASPAR yes 26825722
chr1 12551314 12551319 ATF1 TRANSFAC yes 26825724
chr1 12551317 12551329 PKNOX1 JASPAR yes 26825725
chr1 12551317 12551329 PKNOX2 JASPAR yes 26825726
Genes associated with rs553068731[chr1:12551317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More