EnhancerDB
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  3. rs553077624[chr2:238340068]
Enhancers that have rs553077624[chr2:238340068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553077624[chr2:238340068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238340061 238340076 FOXP1 JASPAR yes 82108180
chr2 238340062 238340076 GATA2 JASPAR yes 82108181
chr2 238340062 238340077 LEF1 JASPAR yes 82108182
chr2 238340064 238340072 GATA3 JASPAR yes 82108183
chr2 238340067 238340073 TBP TRANSFAC yes 82108184
Genes associated with rs553077624[chr2:238340068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More