EnhancerDB
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  3. rs553162951[chr1:31960791]
Enhancers that have rs553162951[chr1:31960791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs553162951[chr1:31960791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31960783 31960796 SCRT2 JASPAR yes 27933250
chr1 31960783 31960798 SCRT1 JASPAR yes 27933251
chr1 31960787 31960796 SNAI2 JASPAR yes 27933252
chr1 31960787 31960797 FIGLA JASPAR yes 27933253
chr1 31960787 31960797 TCF3 JASPAR yes 27933254
chr1 31960787 31960797 TCF4 JASPAR yes 27933255
chr1 31960789 31960798 ZEB1 JASPAR yes 27933256
chr1 31960791 31960796 SP1 TRANSFAC yes 27933257
chr1 31960791 31960802 NFE2 JASPAR yes 27933258
Genes associated with rs553162951[chr1:31960791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More