EnhancerDB
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  3. rs553195938[chr16:85965454]
Enhancers that have rs553195938[chr16:85965454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85952805 85976115 enh4176
Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr16 85965310 85965492 vista23365
VISTA
Transcript factors that have rs553195938[chr16:85965454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85964865 85965841 ZNF274 GTRD no Blood (GM12878) 21731135
chr16 85964865 85965841 ZNF274 GTRD no Blood (GM12878) 108217635
chr16 85964969 85965684 ZNF274 GTRD no Blood (GM12878) 21731136
chr16 85964969 85965684 ZNF274 GTRD no Blood (GM12878) 108217636
chr16 85964999 85965678 ZNF274 GTRD no Blood (GM12878) 21731137
chr16 85964999 85965678 ZNF274 GTRD no Blood (GM12878) 108217637
chr16 85965029 85965559 ZNF274 GTRD no Blood (GM12878) 21731138
chr16 85965029 85965559 ZNF274 GTRD no Blood (GM12878) 108217638
chr16 85965117 85965509 ZNF274 GTRD no Blood (GM12878) 21731139
chr16 85965117 85965509 ZNF274 GTRD no Blood (GM12878) 108217639
chr16 85965129 85965614 ZNF143 GTRD no Epithelial (MCF-7) 108217640
chr16 85965159 85965623 ZNF143 GTRD no Epithelial (MCF-7) 108217641
chr16 85965444 85965465 IRF1 JASPAR yes 12106803
chr16 85965444 85965465 IRF1 JASPAR yes 49411027
chr16 85965446 85965461 PRDM1 JASPAR yes 12106804
chr16 85965446 85965461 PRDM1 JASPAR yes 49411028
chr16 85965453 85965463 GABPA JASPAR yes 12106805
chr16 85965453 85965463 GABPA JASPAR yes 49411029
Genes associated with rs553195938[chr16:85965454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More