EnhancerDB
  1. Home
  2. SNP
  3. rs553228820[chr19:6247912]
Enhancers that have rs553228820[chr19:6247912]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs553228820[chr19:6247912]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6247894 6247914 RREB1 JASPAR yes 112264008
chr19 6247895 6247915 RREB1 JASPAR yes 112264009
chr19 6247899 6247919 RREB1 JASPAR yes 112264011
chr19 6247901 6247916 FOXA1 JASPAR yes 112264012
chr19 6247902 6247914 FOXI1 JASPAR yes 112264013
chr19 6247902 6247917 FOXP1 JASPAR yes 112264014
chr19 6247903 6247915 FOXC2 JASPAR yes 112264015
chr19 6247905 6247916 FOXA1 JASPAR yes 112264016
chr19 6247906 6247921 FOXP1 JASPAR yes 112264017
Genes associated with rs553228820[chr19:6247912], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More