EnhancerDB
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  3. rs553261868[chr1:90407998]
Enhancers that have rs553261868[chr1:90407998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs553261868[chr1:90407998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90407993 90408007 ONECUT1 JASPAR yes 30636516
chr1 90407993 90408007 ONECUT2 JASPAR yes 30636517
chr1 90407993 90408007 ONECUT3 JASPAR yes 30636518
chr1 90407994 90408004 CUX1 JASPAR yes 30636519
chr1 90407994 90408004 CUX2 JASPAR yes 30636520
Genes associated with rs553261868[chr1:90407998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More