EnhancerDB
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  3. rs553269180[chr1:116068655]
Enhancers that have rs553269180[chr1:116068655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116064756 116076235 enh58144
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553269180[chr1:116068655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116068641 116068657 POU4F2 JASPAR yes 31744362
chr1 116068648 116068658 ALX3 JASPAR yes 31744363
chr1 116068648 116068658 EMX2 JASPAR yes 31744364
chr1 116068648 116068658 ESX1 JASPAR yes 31744365
chr1 116068648 116068658 EVX1 JASPAR yes 31744366
chr1 116068648 116068658 EVX2 JASPAR yes 31744367
chr1 116068648 116068658 HESX1 JASPAR yes 31744368
chr1 116068648 116068658 HOXB2 JASPAR yes 31744369
chr1 116068648 116068658 LHX2 JASPAR yes 31744370
chr1 116068648 116068658 MEOX1 JASPAR yes 31744371
chr1 116068648 116068658 MEOX2 JASPAR yes 31744372
chr1 116068648 116068658 MNX1 JASPAR yes 31744373
chr1 116068649 116068657 LBX1 JASPAR yes 31744374
chr1 116068649 116068657 PDX1 JASPAR yes 31744375
chr1 116068649 116068657 VAX1 JASPAR yes 31744376
chr1 116068649 116068657 VAX2 JASPAR yes 31744377
chr1 116068649 116068657 VSX1 JASPAR yes 31744378
chr1 116068649 116068657 VSX2 JASPAR yes 31744379
chr1 116068649 116068663 POU1F1 JASPAR yes 31744380
chr1 116068650 116068662 POU3F1 JASPAR yes 31744381
chr1 116068650 116068662 POU3F2 JASPAR yes 31744382
chr1 116068650 116068663 POU3F3 JASPAR yes 31744383
Genes associated with rs553269180[chr1:116068655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More