EnhancerDB
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  3. rs553287276[chr1:212422549]
Enhancers that have rs553287276[chr1:212422549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs553287276[chr1:212422549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212422542 212422562 RREB1 JASPAR yes 35115148
chr1 212422544 212422564 RREB1 JASPAR yes 35115149
chr1 212422546 212422566 RREB1 JASPAR yes 35115150
chr1 212422547 212422553 HiNF-A TRANSFAC yes 35115151
chr1 212422548 212422568 RREB1 JASPAR yes 35115152
Genes associated with rs553287276[chr1:212422549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More