EnhancerDB
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  3. rs553298706[chr17:29908013]
Enhancers that have rs553298706[chr17:29908013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29902607 29916333 enh17096
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs553298706[chr17:29908013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29907756 29908020 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249668
chr17 29907878 29908394 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750160
chr17 29907878 29908394 TFAP2C UCSC Txn Factor no Conserved 108249669
chr17 29907878 29908394 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249670
chr17 29907905 29908435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750161
chr17 29907905 29908435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249671
chr17 29908008 29908364 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21750162
Genes associated with rs553298706[chr17:29908013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More