EnhancerDB
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  3. rs553319540[chr10:25186223]
Enhancers that have rs553319540[chr10:25186223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553319540[chr10:25186223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25186209 25186223 TCF7L2 JASPAR yes 126102565
chr10 25186219 25186231 TEAD1 JASPAR yes 126102566
chr10 25186220 25186228 TEAD3 JASPAR yes 126102567
Genes associated with rs553319540[chr10:25186223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More