EnhancerDB
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  3. rs553391939[chr12:120483002]
Enhancers that have rs553391939[chr12:120483002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120468885 120488315 enh2632
Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Esophagus Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs553391939[chr12:120483002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120482996 120483008 POU2F1 JASPAR yes 124148221
chr12 120482996 120483009 POU3F3 JASPAR yes 124148222
chr12 120482996 120483010 POU1F1 JASPAR yes 124148223
chr12 120482997 120483009 POU3F1 JASPAR yes 124148224
chr12 120482997 120483009 POU3F2 JASPAR yes 124148225
chr12 120482997 120483010 POU2F2 JASPAR yes 124148226
chr12 120482998 120483007 POU3F4 JASPAR yes 124148227
chr12 120482998 120483007 POU5F1B JASPAR yes 124148228
chr12 120482999 120483006 POU2F1 TRANSFAC yes 124148229
chr12 120482999 120483006 POU2F2 TRANSFAC yes 124148230
chr12 120483002 120483014 IRF1 JASPAR yes 124148231
Genes associated with rs553391939[chr12:120483002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More