EnhancerDB
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  3. rs553392566[chr1:2215975]
Enhancers that have rs553392566[chr1:2215975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs553392566[chr1:2215975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2215969 2215984 TFAP2C JASPAR yes 26231542
chr1 2215970 2215981 TFAP2A JASPAR yes 26231543
chr1 2215970 2215981 TFAP2B JASPAR yes 26231544
chr1 2215970 2215981 TFAP2C JASPAR yes 26231545
chr1 2215970 2215982 TFAP2A JASPAR yes 26231546
chr1 2215970 2215982 TFAP2B JASPAR yes 26231547
chr1 2215970 2215982 TFAP2C JASPAR yes 26231548
chr1 2215970 2215983 TFAP2B JASPAR yes 26231549
chr1 2215970 2215983 TFAP2C JASPAR yes 26231550
chr1 2215971 2215980 TFAP2A JASPAR yes 26231551
chr1 2215973 2215983 ZNF740 JASPAR yes 26231552
Genes associated with rs553392566[chr1:2215975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More