EnhancerDB
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  3. rs553400399[chr17:70145857]
Enhancers that have rs553400399[chr17:70145857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70145111 70151163 enh32347
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Thyroid Breast Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs553400399[chr17:70145857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70145850 70145860 TBX21 JASPAR yes 55761300
chr17 70145850 70145861 TBX20 JASPAR yes 55761301
chr17 70145850 70145861 TBX2 JASPAR yes 55761302
chr17 70145850 70145863 EOMES JASPAR yes 55761303
chr17 70145851 70145859 MGA JASPAR yes 55761304
chr17 70145851 70145859 TBX15 JASPAR yes 55761305
chr17 70145851 70145859 TBX1 JASPAR yes 55761306
chr17 70145851 70145859 TBX4 JASPAR yes 55761307
chr17 70145851 70145859 TBX5 JASPAR yes 55761308
chr17 70145851 70145861 TBR1 JASPAR yes 55761309
Genes associated with rs553400399[chr17:70145857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More