EnhancerDB
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  3. rs553403193[chr1:180553183]
Enhancers that have rs553403193[chr1:180553183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180547465 180559715 enh12426
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs553403193[chr1:180553183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180551786 180553218 ZNF274 GTRD no Bone Marrow (K562) 21353744
chr1 180552262 180553336 ZNF143 GTRD no Epithelial (MCF-7) 21353751
chr1 180552271 180553283 ZNF143 GTRD no Epithelial (MCF-7) 21353752
chr1 180552338 180553320 ZNF143 GTRD no Epithelial (MCF-7) 21353754
chr1 180552362 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353756
chr1 180552388 180553244 ZNF143 GTRD no Epithelial (MCF-7) 21353757
chr1 180552399 180553205 ZNF143 GTRD no Epithelial (MCF-7) 21353758
chr1 180552402 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353759
chr1 180552413 180553446 ZNF143 GTRD no Epithelial (MCF-7) 21353760
chr1 180552452 180553257 ZNF143 GTRD no Epithelial (MCF-7) 21353761
chr1 180552454 180553230 ZNF143 GTRD no Epithelial (MCF-7) 21353762
chr1 180552474 180553241 ZNF143 GTRD no Epithelial (MCF-7) 21353763
chr1 180552581 180553204 ZNF143 GTRD no Epithelial (MCF-7) 21353766
chr1 180553170 180553185 MEF2C JASPAR yes 33528331
chr1 180553171 180553186 MEF2A JASPAR yes 33528332
chr1 180553172 180553184 MEF2A JASPAR yes 33528333
chr1 180553172 180553184 MEF2B JASPAR yes 33528334
chr1 180553172 180553184 MEF2D JASPAR yes 33528335
chr1 180553178 180553193 MEF2C JASPAR yes 33528336
chr1 180553178 180553199 IRF1 JASPAR yes 33528337
chr1 180553179 180553194 FOXP1 JASPAR yes 33528338
chr1 180553179 180553200 IRF1 JASPAR yes 33528339
chr1 180553180 180553195 FOXP1 JASPAR yes 33528340
chr1 180553181 180553196 FOXP1 JASPAR yes 33528341
chr1 180553181 180553202 IRF1 JASPAR yes 33528342
chr1 180553182 180553197 FOXP1 JASPAR yes 33528343
chr1 180553182 180553203 IRF1 JASPAR yes 33528344
chr1 180553183 180553198 FOXP1 JASPAR yes 33528345
chr1 180553183 180553204 IRF1 JASPAR yes 33528346
Genes associated with rs553403193[chr1:180553183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More