EnhancerDB
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  3. rs553407651[chr17:54777999]
Enhancers that have rs553407651[chr17:54777999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54773925 54780615 enh17237
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553407651[chr17:54777999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54777990 54778011 IRF1 JASPAR yes 54904821
chr17 54777991 54778012 IRF1 JASPAR yes 54904822
chr17 54777992 54778007 PRDM1 JASPAR yes 54904823
chr17 54777992 54778007 STAT2 JASPAR yes 54904824
chr17 54777995 54778016 IRF1 JASPAR yes 54904825
chr17 54777996 54778011 FOXP1 JASPAR yes 54904826
chr17 54777998 54778013 FOXP1 JASPAR yes 54904827
chr17 54777999 54778020 IRF1 JASPAR yes 54904828
Genes associated with rs553407651[chr17:54777999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More