EnhancerDB
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  3. rs553416610[chr17:74599087]
Enhancers that have rs553416610[chr17:74599087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74587425 74603995 enh17387
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs553416610[chr17:74599087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74598788 74599697 TCF7L2 GTRD no Colon (HCT116) 21788538
chr17 74598944 74599535 ZNF274 GTRD no Bone Marrow (K562) 21788539
chr17 74599032 74599419 ZNF143 GTRD no Epithelial (MCF-7) 21788540
chr17 74599078 74599096 NFYA JASPAR yes 56014429
chr17 74599082 74599092 HOXA13 JASPAR yes 56014430
chr17 74599082 74599092 HOXB13 JASPAR yes 56014431
chr17 74599082 74599092 HOXD13 JASPAR yes 56014432
chr17 74599083 74599093 ALX3 JASPAR yes 56014433
chr17 74599083 74599093 ESX1 JASPAR yes 56014434
chr17 74599083 74599093 GBX2 JASPAR yes 56014435
chr17 74599083 74599093 GSX1 JASPAR yes 56014436
chr17 74599083 74599093 GSX2 JASPAR yes 56014437
chr17 74599083 74599093 HESX1 JASPAR yes 56014438
chr17 74599083 74599093 LBX2 JASPAR yes 56014439
chr17 74599083 74599093 LHX2 JASPAR yes 56014440
chr17 74599083 74599093 MIXL1 JASPAR yes 56014441
chr17 74599083 74599093 MNX1 JASPAR yes 56014442
chr17 74599083 74599093 RAX JASPAR yes 56014443
chr17 74599084 74599092 BARX1 JASPAR yes 56014444
chr17 74599084 74599092 BSX JASPAR yes 56014445
chr17 74599084 74599092 DLX6 JASPAR yes 56014446
chr17 74599084 74599092 ISX JASPAR yes 56014447
chr17 74599084 74599092 LBX1 JASPAR yes 56014448
chr17 74599084 74599092 LHX9 JASPAR yes 56014449
chr17 74599084 74599092 MSX1 JASPAR yes 56014450
chr17 74599084 74599092 MSX2 JASPAR yes 56014451
chr17 74599084 74599092 NKX6-2 JASPAR yes 56014452
chr17 74599084 74599092 PRRX1 JASPAR yes 56014453
chr17 74599084 74599092 RAX2 JASPAR yes 56014454
chr17 74599084 74599092 SHOX JASPAR yes 56014455
chr17 74599084 74599092 UNCX JASPAR yes 56014456
chr17 74599084 74599099 NFYB JASPAR yes 56014457
Genes associated with rs553416610[chr17:74599087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More