EnhancerDB
  1. Home
  2. SNP
  3. rs553419428[chr2:224646131]
Enhancers that have rs553419428[chr2:224646131]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224641685 224672795 enh6172
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs553419428[chr2:224646131]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224646114 224646135 IRF1 JASPAR yes 81285983
chr2 224646122 224646137 STAT2 JASPAR yes 81285984
chr2 224646124 224646138 IRF8 JASPAR yes 81285985
chr2 224646124 224646139 IRF9 JASPAR yes 81285986
Genes associated with rs553419428[chr2:224646131], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More