EnhancerDB
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  3. rs553420166[chr19:4972278]
Enhancers that have rs553420166[chr19:4972278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553420166[chr19:4972278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4969752 4972866 ZNF274 GTRD no Blood (GM12878) 108373950
chr19 4970334 4972312 ZNF143 GTRD no Epithelial (MCF-7) 21842847
chr19 4970334 4972312 ZNF143 GTRD no Epithelial (MCF-7) 108373958
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 21842892
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 108374026
chr19 4972273 4972282 SP1 TRANSFAC yes 112200576
Genes associated with rs553420166[chr19:4972278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More