EnhancerDB
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  3. rs553453138[chr10:24745949]
Enhancers that have rs553453138[chr10:24745949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 24740285 24755345 enh13061
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs553453138[chr10:24745949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 24745942 24745952 ALX3 JASPAR yes 126075924
chr10 24745942 24745952 GSX2 JASPAR yes 126075925
chr10 24745942 24745952 MIXL1 JASPAR yes 126075926
chr10 24745942 24745952 MNX1 JASPAR yes 126075927
chr10 24745943 24745951 ISX JASPAR yes 126075928
chr10 24745943 24745951 LMX1A JASPAR yes 126075929
chr10 24745943 24745951 LMX1B JASPAR yes 126075930
chr10 24745943 24745951 NKX6-1 JASPAR yes 126075931
chr10 24745943 24745951 NKX6-2 JASPAR yes 126075932
chr10 24745943 24745951 PRRX1 JASPAR yes 126075933
chr10 24745943 24745951 RAX2 JASPAR yes 126075934
chr10 24745943 24745951 SHOX JASPAR yes 126075935
chr10 24745943 24745951 UNCX JASPAR yes 126075936
chr10 24745943 24745951 VAX1 JASPAR yes 126075937
chr10 24745945 24745966 IRF1 JASPAR yes 126075938
chr10 24745948 24745954 TBP TRANSFAC yes 126075939
Genes associated with rs553453138[chr10:24745949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More