EnhancerDB
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  3. rs553460085[chr16:88373081]
Enhancers that have rs553460085[chr16:88373081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs553460085[chr16:88373081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88369785 88373141 ZNF143 GTRD no Epithelial (MCF-7) 21736132
chr16 88370856 88373232 ZNF274 GTRD no Bone Marrow (K562) 21736142
chr16 88372753 88373142 ZNF274 GTRD no Bone Marrow (K562) 21736155
chr16 88373076 88373088 INSM1 JASPAR yes 12280689
chr16 88373080 88373098 RARA JASPAR yes 12280690
chr16 88373081 88373091 SP1 JASPAR yes 12280691
chr16 88373081 88373102 ZNF263 JASPAR yes 12280692
Genes associated with rs553460085[chr16:88373081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More