EnhancerDB
  1. Home
  2. SNP
  3. rs553467730[chr1:33400885]
Enhancers that have rs553467730[chr1:33400885]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33395720 33407455 enh214
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs553467730[chr1:33400885]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33400879 33400889 MAX JASPAR yes 28014646
chr1 33400879 33400891 HES5 JASPAR yes 28014647
chr1 33400879 33400891 HES7 JASPAR yes 28014648
chr1 33400879 33400891 PKNOX1 JASPAR yes 28014649
chr1 33400879 33400891 PKNOX2 JASPAR yes 28014650
chr1 33400879 33400891 TGIF1 JASPAR yes 28014651
chr1 33400879 33400891 TGIF2 JASPAR yes 28014652
Genes associated with rs553467730[chr1:33400885], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More