EnhancerDB
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  3. rs553479139[chr2:236418035]
Enhancers that have rs553479139[chr2:236418035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553479139[chr2:236418035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236418021 236418041 TP53 JASPAR yes 81975906
chr2 236418030 236418040 SP1 JASPAR yes 81975908
chr2 236418030 236418049 PAX5 JASPAR yes 81975909
chr2 236418033 236418038 SP1 TRANSFAC yes 81975910
Genes associated with rs553479139[chr2:236418035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More