EnhancerDB
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  3. rs553480604[chr1:202062294]
Enhancers that have rs553480604[chr1:202062294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553480604[chr1:202062294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202061920 202063680 ZNF274 GTRD no Cervix (HeLa-S3) 21367016
chr1 202062097 202062505 ZNF274 GTRD no Cervix (HeLa-S3) 21367017
chr1 202062168 202062520 ZNF274 GTRD no Bone Marrow (K562) 21367018
chr1 202062193 202062588 ZNF274 GTRD no Liver (HepG2) 21367019
chr1 202062285 202062304 REST JASPAR yes 34552878
chr1 202062290 202062309 PAX5 JASPAR yes 34552879
Genes associated with rs553480604[chr1:202062294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More