EnhancerDB
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  3. rs553509927[chr1:24534779]
Enhancers that have rs553509927[chr1:24534779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24520263 24535320 enh49684
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Breast Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Epithelial (MCF-7)
Transcript factors that have rs553509927[chr1:24534779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24534769 24534781 ZBTB7B JASPAR yes 27487370
chr1 24534773 24534787 FOXF2 JASPAR yes 27487371
chr1 24534774 24534788 PLAG1 JASPAR yes 27487372
chr1 24534776 24534788 FOXI1 JASPAR yes 27487373
chr1 24534778 24534786 FOXG1 JASPAR yes 27487374
Genes associated with rs553509927[chr1:24534779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More