EnhancerDB
  1. Home
  2. SNP
  3. rs553519254[chr7:101642461]
Enhancers that have rs553519254[chr7:101642461]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 101610847 101660015 enh9950
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553519254[chr7:101642461]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 101642452 101642466 EBF1 JASPAR yes 16820683
chr7 101642453 101642464 EBF1 JASPAR yes 16820684
chr7 101642461 101642475 GATA2 JASPAR yes 16820685
Genes associated with rs553519254[chr7:101642461], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More